Online Functional Gene Enrichment
This web-based tool will help you identify what functional categories are over-represented in a gene list. With one click, the tool will perform enrichment analysis on a variety of categories including
function, localization, pathways, protein domains, etc.
Venn Diagram with Numeric Numbers
Plot area-proportional Venn diagrams based on values or computed overlaps
Dataset Overlap and Venn Diagram
Compute the overlap and unique items among multiple large datasets
Calculate Concentrations Using a Standard Curve
This program plots standard curve, calculates linear fitting equation and R2, and computes concentrations based on measurements and standard curve.
- Free Metabolite/Chemical Compound Database
This database allows searching metabolites and chemical compounds based on mass, formula, annotation and other conditions. It is very useful for proteomics and metabolomics studies. The database collects over
20,000 metabolites/chemical compounds. The information includes Name, Formula, Mass, Mass Diff, RT and more. Most records are linked to CAS, METLIN, KEGG, HMP, LMP, and other databases. Users can also add their
own compounds or notes.
- Smart Way to Align Protein or DNA Sequences
Typically, the purpose to align sequences is to find the difference. Why not try this online Smart Sequence Alignment Tool? It summarizes the alignment results (insertion, deletion, and mutation), and
highlights them directly. This tool can also compare protein or DNA sequences using a global alignment (ggsearch) or produce
multiple non-overlapping alignments for protein and DNA sequences (lalign).
- Documents for Bio-Linux Tools (command-line bio-software)
Still using Linux command line bio-software? Here you can find documents for many of them, e.g., abiview, lalign, blastall, and a lot more. There are
documents for over 500 bio-tools!