tblastn

Name tblastn
Description

tblastn is part of the new blast+ package from the NCBI.

tblastn compares a protein query sequence against a nucleotide sequence database dynamically translated in all six reading frames (both strands)

Help on the options available can be found by typing tblastn -help


Homepage http://www.ncbi.nlm.nih.gov/bookshelf/br.fcgi?book=helpblast&part=CmdLineAppsManual  
Remote Documentation http://www.ncbi.nlm.nih.gov/bookshelf/br.fcgi?book=helpblast&part=CmdLineAppsManual

http://www.ncbi.nlm.nih.gov/bookshelf/br.fc
 

User manual for blast+ (tblastn) programs