segmasker

Name segmasker
Description

segmasker is part of the new blast+ package from the NCBI.

segmasker is used to mask repeats and low-complexity regions in a genome sequence.

Help on the options available can be found by typing segmasker -help


Homepage http://www.ncbi.nlm.nih.gov/bookshelf/br.fcgi?book=helpblast&part=CmdLineAppsManual  
Remote Documentation http://www.ncbi.nlm.nih.gov/bookshelf/br.fcgi?book=helpblast&part=CmdLineAppsManual

http://www.ncbi.nlm.nih.gov/bookshelf/br.fc
 

User manual for blast+ (segmasker) programs