gendist

Name gendist
Description

gendist is a part of the PHYLIP package

Copyright 1986-2004 by the University of Washington. Written by Joseph Felsenstein. Permission is granted to copy this document provided that no fee is charged for it and that this copyright notice is not removed.

This program computes any one of three measures of genetic distance from a set of gene frequencies in different populations (or species). The three are Nei's genetic distance (Nei, 1972), Cavalli-Sforza's chord measure (Cavalli- Sforza and Edwards, 1967) and Reynolds, Weir, and Cockerham's (1983) genetic distance. These are written to an output file in a format that can be read by the distance matrix phylogeny programs FITCH and KITSCH.

References
Felsenstein, J. 1993. PHYLIP (Phylogeny Inference Package) version 3.5c. Distributed by the author. Department of Genetics, University of Washington, Seattle.

Felsenstein, J. 1989. PHYLIP -- Phylogeny Inference Package (Version 3.2). Cladistics 5: 164-166.


Homepage http://evolution.genetics.washington.edu/phylip.html  
Remote Documentation http://evolution.genetics.washington.edu/phylip/doc/gendist.html