clcsequenceviewer

Name clcsequenceviewer
Description

CLC Sequence Viewer (formerly CLC free workbench) is a graphical environment in which you can carry out many basic bioinformatics tasks. Some of the functionality available is listed below:

  • Multiple alignment of DNA, RNA, and proteins
  • Consensus sequence determination
  • Conservation score along alignments
  • Basic gene finding
  • Translation from DNA to proteins (all genetic translation tables)
  • Reports with residue composition, molecular weight and iso electric point (for proteins)
  • Neighbor-joining and UPGMA phylogenies
  • Restriction site analysis and viewing
  • Create reverse complement
  • Shuffle sequence

Homepage http://clcbio.com/index.php?area=software§ion=free  
Remote Documentation http://clcbio.com/files/free_finalManual_A4.pdf